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Bio::DB::SeqVersion.3pm
Langue: en
Version: 2010-05-19 (ubuntu - 24/10/10)
Section: 3 (Bibliothèques de fonctions)
Sommaire
NAME
Bio::DB::SeqVersion - front end to querying databases for identifier versionsSYNOPSIS
use Bio::DB::SeqVersion; my $query = Bio::DB::SeqVersion->new(-type => 'gi'); my @all_gis = $query->get_all(2); my $live_gi = $query->get_recent(2);
DESCRIPTION
The default type is 'gi'.FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Support
Please direct usage questions or support issues to the mailing list:bioperl-l@bioperl.org
rather than to the module maintainer directly. Many experienced and reponsive experts will be able look at the problem and quickly address it. Please include a thorough description of the problem with code and data examples if at all possible.
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:http://bugzilla.open-bio.org/
AUTHOR - Brian Osborne
Email bosborne at alum.mit.eduCONTRIBUTORS
Torsten Seemann - torsten.seemann AT infotech.monash.edu.auAPPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _new()
Usage : my $obj = Bio::DB::SeqVersion->new(); Function: Create a Bio::DB::SeqVersion object Returns : An instance of Bio::DB::SeqVersion Args : -type Identifier namespace, default is 'gi'
get_recent()
Usage : Function: Example : Returns : Args :
get_all()
Usage : Function: Example : Returns : Args :
_load_seqversion_module
Title : _load_seqversion_module Usage : Used internally Function: Loads up a module at run time on demand Example : Returns : Args : Name of identifier type
default_id_type
Title : default_id_type Usage : my $type = $self->default_id_type Function: Returns default identifier type for this module Returns : string Args : none
Contenus ©2006-2024 Benjamin Poulain
Design ©2006-2024 Maxime Vantorre