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GO::Parsers::go_xref_parser.3pm
Langue: en
Version: 2007-03-03 (debian - 07/07/09)
Section: 3 (Bibliothèques de fonctions)
NAME
GO::Parsers::go_xref_parser - syntax parsing of GO xref flat files (eg eg2go, metacyc2go)
SYNOPSIS
do not use this class directly; use GO::Parser
DESCRIPTION
This generates Stag event streams from one of the various GO flat file formats (ontology, defs, xref, associations). See GO::Parser for detailsExamples of these files can be found at http://www.geneontology.org
A description of the event streams generated follows; Stag or an XML handler can be used to catch these events
GO XREF FILES
These files have a filename *2go; eg metacyc2go(dbxrefs (termdbxref+ (termacc "s") (dbxref (xref_dbname "s") (xref_key "s"))))
AUTHOR
Contenus ©2006-2024 Benjamin Poulain
Design ©2006-2024 Maxime Vantorre