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abiview.1e

NAME

abiview - Reads ABI file and display the trace

SYNOPSIS

abiview -infile infile -outseq seqout -graph xygraph [-startbase integer] [-endbase integer] -separate boolean [-yticks boolean] [-sequence boolean] [-window integer] [-bases string]

abiview -help

DESCRIPTION

abiview

is a command line program from EMBOSS ("the European Molecular Biology Open Software Suite"). It is part of the "Display" command group(s).

OPTIONS

Input section

-infile infile

Output section

-outseq seqout

-graph xygraph

-startbase integer

-endbase integer

Last sequence base to report or display. If the default is set to zero then the value of this is taken as the maximum number of bases.

-separate boolean

Default value: N

-yticks boolean

Default value: N

-sequence boolean

Default value: Y

-window integer

Default value: 40

-bases string

Default value: GATC

BUGS

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO

abiview is fully documented via the tfm(1) system.

AUTHOR

Debian EMBOSS Packaging Team <pkg-emboss-devel@lists.alioth.debian.org>

Wrote the script used to autogenerate this manual page.

COPYRIGHT

Copyright © 2007 Debian EMBOSS Packaging Team

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.