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asn2xml

Langue: en

Autres versions - même langue

Version: 253384 (debian - 07/07/09)

Section: 1 (Commandes utilisateur)

NAME

asn2xml - translate biological data from ASN.1 to XML

SYNOPSIS

asn2xml [-] [-b F] [-e] [-i filename] [-l filename] [-o filename] [-s]

DESCRIPTION

asn2xml converts an NCBI Seq-entry or Bioseq-set from ASN.1 format to an isomorphic XML representation. It differs from asn2asn -x in that it converts packed sequence data back into human-readable ASCII text.

OPTIONS

A summary of options is included below.
-
Print usage message
-b F
Input asnfile in text mode
-e
Input is a Seq-entry
-i filename
Read ASN.1 from filename (default is stdin)
-l filename
Log errors to filename (default is stderr)
-o filename
Write XML to filename (default is stdout)
-s
Input is a Seq-submit

AUTHOR

The National Center for Biotechnology Information.

SEE ALSO

asn2all(1), asn2asn(1), asn2ff(1), asn2fsa(1), asn2gb(1), asndhuff(1), gene2xml(1), /usr/share/doc/ncbi-tools-bin/README.asn2xml, /usr/share/doc/libncbi6/ncbixml.txt.gz
Ventre affamé n'a pas d'oreilles, mais il a un sacré nez.
-+- Alphonse Allais -+-