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trcyk
Langue: en
Version: 332186 (ubuntu - 24/10/10)
Section: 1 (Commandes utilisateur)
Sommaire
NAME
- trcyk - align sequences to a CM under the TrCYK model
SYNOPSIS
trcyk cmfile seqfileDESCRIPTION
trcyk reads the covariance model (CM) in cmfile and aligns the sequences in seqfile to that CM using the TrCYK model for incomplete data.
The output gives the name of each aligned sequence, the score for the alignment, and the alignment itself. The '~' character in the sequence indicates residues that have been treated as missing data.
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