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Bio::AlignIO::prodom.3pm
Langue: en
Version: 2008-01-11 (mandriva - 01/05/08)
Section: 3 (Bibliothèques de fonctions)
NAME
Bio::AlignIO::prodom - prodom sequence input/output streamSYNOPSIS
Do not use this module directly. Use it via the Bio::AlignIO class.DESCRIPTION
This object can transform Bio::Align::AlignI objects to and from prodom flat file databases.FEEDBACK
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the web:
http://bugzilla.open-bio.org/
AUTHORS - Peter Schattner
Email: schattner@alum.mit.eduAPPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _next_aln
Title : next_aln Usage : $aln = $stream->next_aln() Function: returns the next alignment in the stream. Returns : L<Bio::Align::AlignI> object Args : NONE
write_aln
Title : write_aln Usage : $stream->write_aln(@aln) Function: writes the $aln object into the stream in prodom format ###Not yet implemented!### Returns : 1 for success and 0 for error Args : L<Bio::Align::AlignI> object
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