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Bio::Map::LinkagePosition.3pm
Langue: en
Version: 2008-01-11 (mandriva - 01/05/08)
Section: 3 (Bibliothèques de fonctions)
NAME
Bio::Map::LinkagePosition - Create a Position for a Marker that will be placed on a Bio::Map::LinkageMapSYNOPSIS
use Bio::Map::Position; my $position = new Bio::Map::LinkagePosition(-positions => 1, -distance => 22.1 );
# can get listing of positions my @positions = $position->each_position;
DESCRIPTION
Position for a Bio::Map::MarkerI compliant object that will be placed on a Bio::Map::LinkageMap. See Bio::Map::MarkerI and Bio::Map::LinkageMap for detailsFEEDBACK
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AUTHOR - Chad Matsalla
Email bioinformatics1@dieselwurks.comCONTRIBUTORS
Lincoln Stein, lstein@cshl.org Heikki Lehvaslaiho, heikki-at-bioperl-dot-org Jason Stajich jason@bioperl.org Sendu Bala bix@sendu.me.ukAPPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _new
Title : new Usage : my $obj = new Bio::Map::LinkagePosition(-positions => $position, -distance => $distance); Function: Builds a new Bio::Map::LinkagePosition object Returns : Bio::Map::LinkagePosition Args : -order => the relative order of this marker on a linkage map -positions => positions on a map
Bio::Map::PositionI methods
order
Title : order Usage : $o_position->order($order) my $order = $o_position->order() Function: get/set the order position of this position in a map Returns : int Args : none to get, int to set
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