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GO::Model::GeneProduct.3pm
Langue: en
Version: 2008-07-02 (debian - 07/07/09)
Section: 3 (Bibliothèques de fonctions)
Sommaire
NAME
GO::Model::GeneProduct - gene product in a particular species
DESCRIPTION
represents a gene product in a particular species (this will effectively always be refered to implicitly by the gene symbol even though a gene may have >1 product)acc
Usage - Returns - Args -
symbol
Usage - Returns - Args -
type
Usage - Returns - Args -
full_name
Usage - Returns - Args -
as_str
Usage - Returns - Args -
add_synonym
synonym_list
accessor: gets/set list of synonyms [array reference]
speciesdb
Usage - Returns - Args -
add_seq
Usage - Returns - Args - GO::Model::Seq
seq_list
Usage - Returns - GO::Model::Seq listref Args -
seq
Usage - Returns - GO::Model::Seq Args -
returns representative sequence object for this product
properties
Usage - Returns - hashref Args - hashref
set_property
Usage - $sf->set_property("wibble", "on"); Returns - Args - property key, property scalar
note: the property is assumed to be multivalued, therefore
$sf->set_property($k, $scalar) will add to the array, and
$sf->set_property($k, $arrayref) will set the array
get_property
Usage - Returns - first element of the property Args - property key
get_property_list
Usage - Returns - the property arrayref Args - property key
to_fasta
Usage - Returns - Args -
returns the longest seq by default
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