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GO::Model::Root.3pm
Langue: en
Version: 2009-11-06 (ubuntu - 24/10/10)
Section: 3 (Bibliothèques de fonctions)
NAME
GO::Model::Root - base class for all GO::Model objects
DESCRIPTION
base class for all GO::Model objectsConstructors
new
Constructor: Basically just calls _initialize(). Most subclasses should not need to override new, but instead should override _initialize().If _initialize() fails , the procedure will die
WARNING: This procedure will die if initialization is unsuccessful. Use an eval statement to catch such exceptions.
obj_factory
Usage - $obj->obj_factory->create_new_term_object($h); Alias - apph Returns - L<GO::ObjFactory> Args - none
sprint_self
Prints out a description of the object to a string.dump
dumps the object (can be read back in with eval)namespace
Usage - print $term->namespace(); # getting the type Usage - $term->namespace("molecular_function"); # setting the type Alias - type Alias - term_type Alias - category Alias - ontology Returns - string representing type Args - string represnting type [optional]
The OBO namespace for the GO::Model::Term or GO::Model::Relationship
_cleanup
Called at object destruction time. Should be overridden to perform cleanup tasks.Contenus ©2006-2024 Benjamin Poulain
Design ©2006-2024 Maxime Vantorre