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SWISS::Stars::EV.3pm

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addEvidence($category, $type, $initials, $attributes [, $date])

  Title:    addEvidence
 
  Usage:    $evidenceTag = $entry->Stars->EV->addEvidence($category,
                                                          $type, 
                                                          $initials,
                                                          $attributes 
                                                          [, $date])
 
  Function: adds the evidence to the EV block if it does not yet exist 
            or returns the correct evidence tag if the evidence already exists, 
            possibly with a different date.
 
  Args:    $category: the evidence category. Currently one of 'A', 'C', 'I','P'.
           $type: the evidence type
           $initials: The initals of the person doing the update.
                      For programs this should be '-'.
           $attributes: the attributes of the evidence
           $date: optional. If present, it must be in standard SWISS-PROT 
                  date format. If not present the current date will be used.
 
  Returns: The correct evidence tag.
 
 

updateEvidence($category, $type, $initials, $attributes [, $date])

  Title:    updateEvidence
 
  Usage:    $evidenceTag = $entry->Stars->EV->updateEvidence($category, 
                                                             $type, 
                                                             $initials,
                                                             $attributes 
                                                             [, $date])
 
  Function: updates the evidence to the EV block to $date or inserts it 
            if it does not yet exist.
 
  Args:    $category: the evidence category. Currently one of 'A', 'C', 'I','P'.
           $type: the evidence type
           $initials: The initals of the person doing the update.
                      For programs this should be '-'.
           $attributes: the attributes of the evidence
           $date: optional. If present, it must be in standard SWISS-PROT 
                  date format. If not present the current date will be used.
 
  Returns: The correct evidence tag.
 
 

Name

SWISS::Stars::EV.pm

Description

SWISS/Stars/EV.pm represents the evidence section within an SWISS-PROT + TrEMBL entry. See http://www3.ebi.ac.uk/~sp/intern/projects/evidenceTags/index.html

For a usage example, see evTest.pl in the Swissknife package.

Inherits from SWISS::ListBase.pm

Attributes

"list" Each element of the list describes one evidence, itself represented as an array.