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bp_generate_histogram.1p
Langue: en
Version: 2008-06-24 (ubuntu - 07/07/09)
Section: 1 (Commandes utilisateur)
NAME
generate_histogram.pl -- Generate a histogram of Bio::DB::GFF featuresSYNOPSIS
generate_histogram.pl -d gadfly variation gene:curated
DESCRIPTION
Use this utility to generate feature density histograms from Bio::DB::GFF databases. The result is a GFF data file that is suitable for loading with load_gff.pl.OPTIONS
The following options are recognized:
Option Description ------ ----------- --dsn <dsn> Data source (default dbi:mysql:test) --adaptor <adaptor> Schema adaptor (default dbi::mysqlopt) --user <user> Username for mysql authentication --pass <password> Password for mysql authentication --aggregator <list> Comma-separated list of aggregators
BUGS
Please report them.SEE ALSO
Bio::DB::GFFAUTHOR
Lincoln Stein <lstein@cshl.org>Copyright (c) 2001 Cold Spring Harbor Laboratory
This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. See DISCLAIMER.txt for disclaimers of warranty.
Contenus ©2006-2024 Benjamin Poulain
Design ©2006-2024 Maxime Vantorre