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lastdb
Langue: en
Version: May 2010 (ubuntu - 24/10/10)
Section: 1 (Commandes utilisateur)
NAME
lastdb - genome-scale comparison of biological sequencesSYNOPSIS
lastdb [options] output-name fasta-sequence-file(s)DESCRIPTION
Prepare sequences for subsequent alignment with lastal.Main Options: -h: show all options and their default settings -p: interpret the sequences as proteins -c: soft-mask lowercase letters -m: spaced seed pattern
Advanced Options (default settings): -s: volume size (1280 MiB) -w: index step (1) -u: subset seed file -a: user-defined alphabet -b: bucket depth -v: be verbose: write messages about what lastdb is doing
REPORTING BUGS
Report bugs to: last (ATmark) cbrc (dot) jpLAST home page: http://last.cbrc.jp/
Contenus ©2006-2024 Benjamin Poulain
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