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pc-compare

Langue: en

Version: 2007\-04\-04 (debian - 07/07/09)

Section: 1 (Commandes utilisateur)

NAME

pc-compare - Program for scoring alignments according to a reference alignment with respect to sum-of-pairs and column scores.

SYNOPSIS

pc-compare [TEST_ALIGNMENT] [REFERENCE_ALIGNMENT] [BALIBASE_ANNOT_FILE] [-col] [-core] [-caps] [-annot FILENAME]

NOTE

pc-compare is named compare in the original sources, but has been remamed to avoid collision with other program names.

SEE ALSO

pc-makegnufile(1), pc-project(1),from the probcons-extra package, and probcons(1) and probcons-RNA(1) from the probcons package.

REFERENCE

Please cite Do, C.B., Mahabhashyam, M.S.P., Brudno, M., and Batzoglou, S. 2005. PROBCONS: Probabilistic Consistency-based Multiple Sequence Alignment. Genome Research 15: 330-340.

AUTHORS

Chuong Do <chuongdo@cs.stanford.edu>

Wrote probcons in collaboration with Michael Brudno in the research group of Serafim Batzoglou, Department of Computer Science, Stanford University.

Charles Plessy <charles-debian-nospam@plessy.org>

Wrote this manpage in DocBook XML for the Debian distribution.

This program and its manpage are in the public domain.

L'emmerdant dans la morale c'est que c'est toujours celle des autres.
-+- Léo Ferré -+-