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Bio::SeqIO::MultiFile.3pm
Langue: en
Version: 2008-01-11 (mandriva - 01/05/08)
Section: 3 (Bibliothèques de fonctions)
NAME
Bio::SeqIO::MultiFile - Treating a set of files as a single input streamSYNOPSIS
$seqin = Bio::SeqIO::MultiFile( '-format' => 'Fasta', '-files' => ['file1','file2'] ); while((my $seq = $seqin->next_seq)) { # do something with $seq }
DESCRIPTION
Bio::SeqIO::MultiFile provides a simple way of bundling a whole set of identically formatted sequence input files as a single stream.FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to one of the Bioperl mailing lists. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via the web:
http://bugzilla.open-bio.org/
AUTHOR - Ewan Birney
Email birney@ebi.ac.ukAPPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _next_seq
Title : next_seq Usage : Function: Example : Returns : Args :
next_primary_seq
Title : next_primary_seq Usage : Function: Example : Returns : Args :
_load_file
Title : _load_file Usage : Function: Example : Returns : Args :
_set_file
Title : _set_file Usage : Function: Example : Returns : Args :
_current_seqio
Title : _current_seqio Usage : $obj->_current_seqio($newval) Function: Example : Returns : value of _current_seqio Args : newvalue (optional)
_format
Title : _format Usage : $obj->_format($newval) Function: Example : Returns : value of _format Args : newvalue (optional)
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