Rechercher une page de manuel
Bio::Tools::Phylo::Phylip::ProtDist.3pm
Langue: en
Version: 2008-01-11 (mandriva - 01/05/08)
Section: 3 (Bibliothèques de fonctions)
NAME
Bio::Tools::Phylo::Phylip::ProtDist - parser for ProtDist outputSYNOPSIS
use Bio::Tools::Phylo::Phylip::ProtDist; my $parser = new Bio::Tools::Phylo::Phylip::ProtDist(-file => 'outfile'); while( my $result = $parser->next_matrix) { # do something with it }
DESCRIPTION
A parser for ProtDist output into a Bio::Matrix::PhylipDist object. See also Bio::Matrix::IO::phylip this module may go away.FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.
bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:
http://bugzilla.open-bio.org/
AUTHOR - Shawn Hoon
Email shawnh@fugu-sg.orgAPPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _new
Title : new Usage : my $obj = new Bio::Tools::Phylo::Phylip::ProtDist(); Function: Builds a new Bio::Tools::Phylo::Phylip::ProtDist object Returns : Bio::Tools::ProtDist Args : -fh/-file => $val, # for initing input, see Bio::Root::IO -program => 'programname' # name of the program
next_matrix
Title : next_matrix Usage : my $matrix = $parser->next_matrix Function: Get the next result set from parser data Returns : L<Bio::Matrix::PhylipDist> Args : none
Contenus ©2006-2024 Benjamin Poulain
Design ©2006-2024 Maxime Vantorre