Rechercher une page de manuel
Bio::Tools::Prints.3pm
Langue: en
Version: 2008-06-24 (ubuntu - 08/07/09)
Section: 3 (Bibliothèques de fonctions)
NAME
Bio::Tools::Prints - Parser for FingerPRINTScanII programSYNOPSIS
use Bio::Tools::Prints; my $prints_parser = new Bio::Tools::Prints(-fh =>$filehandle ); while( my $prints_feat = $prints_parser->next_result ) { push @prints_feat, $prints_feat; }
DESCRIPTION
PRINTScan II is a PRINTS fingerprint identification algorithm. Copyright (C) 1998,1999 Phil Scordis
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated. bioperl-l@bioperl.org - General discussion http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web: http://bugzilla.open-bio.org/
AUTHOR - Balamurugan Kumarasamy
bala@tll.org.sg juguang@tll.org.sg
APPENDIX
The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _
new
Title : new Usage : my $obj = new Bio::Tools::Prints(-fh=>$filehandle); Function: Builds a new Bio::Tools::Prints object Returns : Bio::Tools::Prints Args : -filename -fh (filehandle)
next_result
Title : next_result Usage : my $feat = $prints_parser->next_result Function: Get the next result set from parser data Returns : L<Bio::SeqFeature::Generic> Args : none
create_feature
Title : create_feature Usage : my $feat=$prints_parser->create_feature($feature,$seqname) Function: creates a SeqFeature Generic object Returns : L<Bio::SeqFeature::FeaturePair> Args :
print_sac
Title : print_sac Usage : $prints_parser->print_sac($print_sac) Function: get/set for print_sac Returns : Args :
seqname
Title : seqname Usage : $prints_parser->seqname($seqname) Function: get/set for seqname Returns : Args :
Contenus ©2006-2024 Benjamin Poulain
Design ©2006-2024 Maxime Vantorre