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SWISS::GN.3pm
Langue: en
Version: 2006-01-26 (ubuntu - 24/10/10)
Section: 3 (Bibliothèques de fonctions)
Name
SWISS::GN.pmDescription
SWISS::GN represents one gene name from the GN line. The container object for several synonym gene names is SWISS::GeneGroup.Inherits from
SWISS::BaseClass.pmAttributes
- "text"
- One gene name.
Methods
Standard methods
- new
- fromText
- toText
Reading/Writing methods
- toMixedCase(@regexps)
- Convert gene names to mixed case, according to one or more regular expressions. This is typically useful for converting uppercase ORF numbers to mixed case. E.g. the E.coli gene ``B1563'' converted with the regexp '(b(\d{4}(\.\d)?))' will yield the gene name ``b1563''. The method also supports fused gene names, e.g. ``B0690/B0691'' is converted to ``b0690/b0691''. The method changes the text of the SWISS::GN object and also returns the new text value.
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