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nps2gps
Langue: en
Version: 312660 (ubuntu - 07/07/09)
Section: 1 (Commandes utilisateur)
NAME
nps2gps - convert nucleotide-protein sets to ASN.1 genomic product setsSYNOPSIS
nps2gps [-] [-F] [-L] [-P] [-R] [-f str] [-i filename] [-o filename] [-p path] [-r path] [-x str]DESCRIPTION
nps2gps converts NCBI Bioseq-sets from simple nucleotide-protein sets to full genomic product sets complete with mRNA transcripts, which it outputs as text ASN.1.OPTIONS
A summary of options is included below.- -
- Print usage message
- -F
- Map by Feature ID
- -L
- Lock components in advance
- -P
- mRNA ID from Protein
- -R
- Enable Remote fetching from ID
- -f str
- Substring filter
- -i filename
- Single input file (default = stdin)
- -o filename
- Single output file (default = stdout)
- -p path
- Path to files for batch conversion
- -r path
- Path for results of batch conversion
- -x str
- File selection suffix for batch conversion (default = .ent)
AUTHOR
The National Center for Biotechnology Information.SEE ALSO
asn2asn(1), asn2ff(1), asn2gb(1), asn2xml(1), asndhuff(1).Contenus ©2006-2024 Benjamin Poulain
Design ©2006-2024 Maxime Vantorre